File SpatialTree.h

↰ Parent directory (necsim)

Contains SpatialTree for running simulations and outputting the phylogenetic tree.

Definition (necsim/SpatialTree.h)

• Program Listing for File SpatialTree.h

Detailed Description

Contact: samuel.thompson14@imperial.ac.uk or thompsonsed@gmail.com MIT Licence.

Includes

• ActivityMap.h (File ActivityMap.h)
• Community.h (File CCommunity.h)
• DataPoint.h (File DataPoint.h)
• DispersalCoordinator.h (File DispersalCoordinator.h)
• GillespieCalculator.h (File GillespieCalculator.h)
• Landscape.h (File Landscape.h)
• Logging.h (File Logging.h)
• Matrix.h (File Matrix.h)
• RNGController.h (File RNGController.h)
• SimParameters.h (File SimParameters.h)
• SpeciesList.h (File SpeciesList.h)
• Tree.h (File ProtractedSpatialTree.h)
• TreeNode.h (File TreeNode.h)
• algorithm
• boost/filesystem.hpp
• cmath
• cstdio
• cstring
• ctime
• fstream
• iomanip
• iostream
• memory
• setup.h (File setup.h)
• sqlite3.h
• stdexcept
• string
• unistd.h
• vector

Included By

• File main.cpp
• File ProtractedSpatialTree.h
• File ProtractedTree.h
• File SpatialTree.cpp

Namespaces

• Namespace necsim

Classes

• Class SpatialTree